Self updating map


28-Apr-2020 01:10

These data types include gene expression, single-nucleotide polymorphism, mi RNA, copy number, DNA methylation and somatic mutations, along with tissue slide images and clinical outcomes.

Since 2011, this data has been available via an HTTP repository ( Jac).

Significantly, these enhancements enable the reporting of analysis results that can be fully traced to and reproduced using their source data.

The resulting RDF map of the TCGA contents is available ( rdf.s3db.googlecode.com/hg/TCGA.rdf), and can be efficiently traversed by a SPARQL engine to quickly discover which files document results that satisfy any number of the constraints recognized by the model.